Selected Publications |
- Torii, H., A. Machida, H. Hara, T. Hatta and N. Takizawa: The regulatory mechanism of 2,4,6-trichlorophenol catabolic operon expression by HadR in Ralstonia pickettii DTP0602. Microbiology, 159(4), 665-677. (2013)
- Fukuhara, Y., N. Kamimura, M. Nakajima, S. Hishiyama, H. Hara, D. Kasai, Y. Tsuji, S. Narita-Yamada, S. Nakamura, Y. Katano, N. Fujita, Y. Katayama, M. Fukuda, S. Kajita, and E. Masai: Discovery of pinoresinol reductase genes in Sphingomonads. Enzyme and Microbial Technology. 52(1): 38-43. (2013)
- Higo, A., H. Hara, S. Horinouchi, and Y. Ohnishi: Genome-wide distribution of AdpA, a global regulator for secondary metabolism and morphological differentiation in Streptomyces, revealed the extent and complexity of the AdpA regulatory network. DNA research, 19(3), 259–273, (2012)
- Masai, E., N. Kamimura, D. Kasai, A. Oguchi, A. Ankai, S. Fukui, M. Takahashi, I. Yashiro, H. Sasaki, T. Harada, S. Nakamura, Y. Katano, S. Narita-Yamada, H. Nakazawa, H. Hara, Y. Katayama, M. Fukuda, S. Yamazaki, and N. Fujita: Complete genome sequence of Sphingobium sp. strain SYK-6, a degrader of lignin-derived biaryls and monoaryls, Journal of Bacteriology, 194(2) 534-535 (2012)
- Kamimura, N., K. Takamura, H. Hara, D. Kasai, R. Natsume, T. Senda, Y. Katayama, M. Fukuda, and E. Masai: Regulatory system of the protocatechuate 4,5-cleavage pathway genes essential for lignin downstream catabolism, Journal of Bacteriology, 192(13) 3394-3405 (2010)
- Shintani, M., Y. Takahashi, H. Tokumaru, K. Kadota, H. Hara, M. Miyakoshi, K. Naito, H. Yamane, H. Nishida, and H. Nojiri: Response of the Pseudomonas host chromosomal transcriptome to carriage of the IncP-7 plasmid pCAR1, Environmental Microbiology, 12(6) 1413-1426 (2010)
- Hara, H., G. R. Stewart, and W. W. Mohn: Involvement of a novel ABC transporter and monoalkyl phthalate ester hydrolase in phthalate ester catabolism by Rhodococcus jostii RHA1. Applied and Environmental Microbiology, 76(5) 1516-1523 (2010)
- Akanuma, G., H. Hara, Y. Ohnishi, and S. Horinouchi: Dynamic changes in the extracellular proteome caused by absence of a pleiotropic regulator AdpA in Streptomyces griseus. Molecular Microbiology., 73(5) 898-912 (2009)
- Tezuka, T., H. Hara, Y. Ohnishi, and S. Horinouchi: Identification and gene disruption of small noncoding RNAs in Streptomyces griseus. Journal of Bacteriology, 191(15) 4896-4904 (2009)
- Hara, H., Y. Ohnishi, and S. Horinouchi: DNA microarray analysis of global gene regulation by A-factor in Streptomyces griseus. Microbiology. 155(7) 2197-2210 (2009)
- Ohnishi, Y., J. Ishikawa, H. Hara, H. Suzuki, M. Ikenoya, H. Ikeda, A. Yamashita, M. Hattori, and S. Horinouchi: Genome sequence of the streptomycin-producing microorganism Streptomyces griseus IFO13350. Journal of Bacteriology, 190(11) 4050-4060 (2008)
- Masai, E., Y. Yamamoto, T. Inoue, K. Takamura, H. Hara, D. Kasai, Y. Katayama and M Fukuda: Characterization of ligV essential for catabolism of vanillin by Sphingomonas paucimobilis SYK-6. Bioscience Biotechnology and Biochemistry. 71(10) 2487-2492 (2007)
- van der Geize, R., K. Yam, T. Heuser, M. H. Wilbrink, H. Hara, W. C. Anderton, E. Sim, L. Dijkhuizen, J. E. Davies, W. W. Mohn, and L. D. Eltis: A gene cluster encoding cholesterol catabolism in a soil actinomycete provides insight into Mycobacterium tuberculosis survival in macrophages. Proceedings of the National Academy of Science. USA. 104(6) 1947-1952 (2007)
- Hara, H., L. D. Eltis, J. E. Davies, and W. W. Mohn: Transcriptomic analysis reveals a bifurcated terephthalate degradation pathway in Rhodococcus sp. RHA1. Journal of Bacteriology, 189(5) 1641-1647 (2007)
- McLeod, M. P., R. L. Warren, N. Araki, W. W. L. Hsiao, M. Myhre, C. Fernandes, D. Miyazawa, W. Wong, A. L. Lillquist, D. Wang, M. Dosanjh, H. Hara, A. Petrescu, R. D. Morin, G. Yang, J. M. Stott, J. E. Schein, H. Shin, D. Smailus, A. S. Siddiqui, M. A. Marra, S. J. M. Jones, R. Holt, F. S. L. Brinkman, K. Miyauchi, M. Fukuda, J. E. Davies, W. W. Mohn, and L. D. Eltis: The complete genome of Rhodococcus sp. RHA1: insights into a catabolic powerhouse. Proceedings of the National Academy of Science. USA. 103(42) 15582-15587 (2006)
- Goncalves, E. R., H. Hara, D. Miyazawa, J. E. Davies, L. D. Eltis, W. W. Mohn: Transcriptomic assessment of isozymes in the biphenyl pathway of Rhodococcus sp. strain RHA1. Applied and Environmental Microbiology, 72(9) 6183-6193. (2006)
- Sasoh, M., E. Masai, S. Ishibashi, H. Hara, N. Kamimura, K. Miyauchi, M. Fukuda. 2006. Characterization of the terephthalate degradation genes of Comamonas sp. strain E6. Applied and Environmental Microbiology, 72(3) 1825-1832 (2006)
- Hara, H., E. Masai, K. Miyauchi, Y. Katayama, and M. Fukuda: Characterization of 4-carboxy-4-hydroxy-2-oxoadipate aldolase gene and operon structure of the protocatechuate 4,5-cleavage pathway genes in Sphingomonas paucimobilis SYK-6. Journal of Bacteriology, 185(1) 41-50 (2003)
- Hara, H., E. Masai, Y. Katayama, and M. Fukuda: The 4-oxalomesaconate hydratase gene, involved in the protocatechuate 4,5-cleavage pathway, is essential to vanillate and syringate degradation in Sphingomonas paucimobilis SYK-6. Journal of Bacteriology, 182(24) 6950-6957. (2000)
- Masai, E., K, Momose, H. Hara, S. Nishikawa, Y. Katayama, and M. Fukuda. 2000. Genetic and biochemical characterization of 4-carboxy-2-hydroxymuconate-6- semialdehyde dehydrogenase and its role in the protocatechuate 4,5-cleavage pathway in Sphingomonas paucimobilis SYK-6. Journal of Bacteriology, 182(23) 6651-6658 (2000)
- Masai, E., S. Shinohara, H. Hara, S. Nishikawa, Y. Katayama, and M. Fukuda. 1999. Genetic and biochemical characterization of a 2-pyrone-4,6-dicarboxylic acid hydrolase involved in the protocatechuate 4, 5-cleavage pathway of Sphingomonas paucimobilis SYK-6. Journal of Bacteriology, 181(1) 55-62 (1999)
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